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Creators/Authors contains: "Lee, Isaiah Paolo"

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  1. Agent-based models are composed of individual agents coded for traits, such as cooperation and cheating, that interact in a virtual world based on defined rules. Here, we describe the use of an agent-based model of homologous recombina- tion in bacteria playing a public goods game. We describe steps for software installation, setting model parameters, running and testing models, and visuali- zation and statistical analysis. This protocol is useful in analyses of horizontal gene transfer, bacterial sociobiology, and game theory. 
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